Darrin Higgins, Noun Project, CC BY 3.0 US: https://creativecommons.org/licenses/by/3.0/us/, https://thenounproject.com/term/dna/3928/, changed black icon to white, increased canvas size

NGS analysis

We run and help maintain the Illumina Analysis Pipeline developed within the CMM.

https://github.com/UMCUGenetics/IAP

This pipeline can perform the different steps required to go from sequencing output (FASTQ) to mapped data (BAM) or called and annotated variants (VCF).

We offer the following services (*prices ex VAT):

AnalysisUnitService fee *Data type
Mapping + germline SNV/InDel callingsample€ 50DNA
CNV + SV callingsample€ 15DNA
Mapping + somatic callingtumor/normal pair€ 120DNA
Mapping + read count analysisrun€ 50mRNA
Differential expression analysis + figurescomplete set€ 50mRNA
* Service fees in euro's, excluding VAT